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Updated: 2025-02-10
RNA CoSSMos Search
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What type of
nucleic acid
are you looking for?
RNA:
DNA:
General Parameters:
PDB ID:
Author:
Keywords
:
Experimental Parameters:
X-Ray Diffraction
to
Ångstroms
Nuclear Magnetic Resonance
to
structures in ensemble
Cryo-Electron Microscopy
Motifs:
Symmetric Internal Loops
Asymmetric Internal Loops
Hairpin Loops
Bulge Loops
1x1
1x2
2x4
3
1
2x2
1x3
2x5
4
2
3x3
1x4
3x4
5
3
4x4
1x5
3x5
6
4
5x5
2x3
4x5
7
5
All motifs
Nucleic Acid Sequence:
(Sequence choices are only included in the search criteria when one motif is selected and are ignored when selecting multiple motifs)
Opening Nucleotides
Motif Sequence
Options
N(any), C, G ,A, U,
Y(C or U), R(A or G)
Closing Nucleotides
5' to 3':
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
3' to 5':
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
N
C
G
A
U
Y
R
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